BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F03LP1|AL425892
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1473 952 0.0
3x_Contig1099 414 e-115
>3x_Contig1473
Length = 8041
Score = 952 bits (480), Expect = 0.0
Identities = 480/480 (100%)
Strand = Plus / Minus
Query: 1 atcaaatccaagtgagagttgacgactgatcaagcagttaacaggtcactctataacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atcaaatccaagtgagagttgacgactgatcaagcagttaacaggtcactctataacttg 421
Query: 61 agatctgatatgaaatccagttttgcaccaattggtctagaacgtggttatgctgggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agatctgatatgaaatccagttttgcaccaattggtctagaacgtggttatgctgggagc 361
Query: 121 agttgaaaacgaaagaagaaaatcgctaatagtaaacagtaactggccagttagaaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agttgaaaacgaaagaagaaaatcgctaatagtaaacagtaactggccagttagaaaaga 301
Query: 181 atttaatataaattaccaacgaaatttacttcaattgtgtaagatcaatgtttttagatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atttaatataaattaccaacgaaatttacttcaattgtgtaagatcaatgtttttagatc 241
Query: 241 aacgtttcagatcaatgcttacctttttcggtttcaatgaggatatatattttttctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aacgtttcagatcaatgcttacctttttcggtttcaatgaggatatatattttttctgtt 181
Query: 301 tggctttccaataatgtaaatagctaaaaaaaacagatcgccccaagattagatgataac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tggctttccaataatgtaaatagctaaaaaaaacagatcgccccaagattagatgataac 121
Query: 361 ctatcagaaagagaaacaagaggtcagtattgctagctacagtgagggatctttggccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctatcagaaagagaaacaagaggtcagtattgctagctacagtgagggatctttggccaa 61
Query: 421 attattaaaatatagctaggatactgatttattctttcaattatttggtggaagtcagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 attattaaaatatagctaggatactgatttattctttcaattatttggtggaagtcagca 1
>3x_Contig1099
Length = 3902
Score = 414 bits (209), Expect = e-115
Identities = 209/209 (100%)
Strand = Plus / Plus
Query: 576 agctttttacattgagatattctaagagacaattgagattgcggcttctcttgacttttg 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctttttacattgagatattctaagagacaattgagattgcggcttctcttgacttttg 60
Query: 636 gattagtacagcatcagccaagacaagggcagccattgcttccacaattggggtggctct 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattagtacagcatcagccaagacaagggcagccattgcttccacaattggggtggctct 120
Query: 696 tggggtgacagaagggtcgtgtctacctttagcagctagaataccagatttaccgtcgta 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggggtgacagaagggtcgtgtctacctttagcagctagaataccagatttaccgtcgta 180
Query: 756 ggtagcagtagcttgttcttgagaaatag 784
|||||||||||||||||||||||||||||
Sbjct: 181 ggtagcagtagcttgttcttgagaaatag 209
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6816
Number of Sequences: 1807
Number of extensions: 6816
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)